All rights reserved (14)#
Basics of Image Processing and Analysis#
[‘Kota Miura’]
Licensed ALL RIGHTS RESERVED
Tags: Bioimage Analysis
Content type: Book
BioImage Data Analysis#
[‘Kota Miura’]
Licensed ALL RIGHTS RESERVED
Tags: Neubias, Bioimage Analysis
Content type: Book
https://analyticalscience.wiley.com/do/10.1002/was.00050003/full/bioimagedataanalysis.pdf
CLIJ: GPU-accelerated image processing for everyone#
[‘Robert Haase’, ‘Loic Royer’, ‘et al.’]
Published 2020
Licensed ALL RIGHTS RESERVED
CLIJ is a collection of image processing functions that use graphics processing units for accelerated processing.
Tags: Imagej, Bioimage Analysis
Content type: Publication
Community-developed checklists for publishing images and image analyses#
[‘Christopher Schmied’, ‘Michael S Nelson’, ‘Sergiy Avilov’, ‘Gert-Jan Bakker’, ‘Cristina Bertocchi’, ‘Johanna Bischof’, ‘Ulrike Boehm’, ‘Jan Brocher’, ‘Mariana T Carvalho’, ‘Catalin Chiritescu’, ‘Jana Christopher’, ‘Beth A Cimini’, ‘Eduardo Conde-Sousa’, ‘Michael Ebner’, ‘Rupert Ecker’, ‘Kevin Eliceiri’, ‘Julia Fernandez-Rodriguez’, ‘Nathalie Gaudreault’, ‘Laurent Gelman’, ‘David Grunwald’, ‘Tingting Gu’, ‘Nadia Halidi’, ‘Mathias Hammer’, ‘Matthew Hartley’, ‘Marie Held’, ‘Florian Jug’, ‘Varun Kapoor’, ‘Ayse Aslihan Koksoy’, ‘Judith Lacoste’, ‘Sylvia Le Dévédec’, ‘Sylvie Le Guyader’, ‘Penghuan Liu’, ‘Gabriel G Martins’, ‘Aastha Mathur’, ‘Kota Miura’, ‘Paula Montero Llopis’, ‘Roland Nitschke’, ‘Alison North’, ‘Adam C Parslow’, ‘Alex Payne-Dwyer’, ‘Laure Plantard’, ‘Rizwan Ali’, ‘Britta Schroth-Diez’, ‘Lucas Schütz’, ‘Ryan T Scott’, ‘Arne Seitz’, ‘Olaf Selchow’, ‘Ved P Sharma’, ‘Martin Spitaler’, ‘Sathya Srinivasan’, ‘Caterina Strambio-De-Castillia’, ‘Douglas Taatjes’, ‘Christian Tischer’, ‘Helena Klara Jambor’]
Licensed ALL RIGHTS RESERVED
Tags: Bioimage Analysis
Content type: Publication
EPFLx: Image Processing and Analysis for Life Scientists#
Licensed ALL RIGHTS RESERVED
Tags: Bioimage Analysis
Content type: Online Course
Imaris Tutorials#
Licensed ALL RIGHTS RESERVED
Tags: Bioimage Analysis
Content type: Collection, Video
MDEmic: a metadata annotation tool to facilitate management of FAIR image data in the bioimaging community#
[‘Susanne Kunis’, ‘Sebastian Hänsch’, ‘Christian Schmidt’, ‘Frances Wong’, ‘Caterina Strambio-De-Castillia’, ‘Stefanie Weidtkamp-Peters’]
Licensed ALL RIGHTS RESERVED
Tags: Research Data Management, Meta Data
Content type: Publication
MicroscopyDB#
Licensed ALL RIGHTS RESERVED
Content type: Collection
OMERO for microscopy research data management#
[‘Thomas Zobel’, ‘Sarah Weischner’, ‘Jens Wendt’]
Licensed ALL RIGHTS RESERVED
A use case example from the Münster Imaging Network
Tags: Nfdi4Bioimage, Omero, Research Data Management
Content type: Publication
https://analyticalscience.wiley.com/do/10.1002/was.0004000267/
Open microscopy in the life sciences: quo vadis?#
[‘Johannes Hohlbein’, ‘Benedict Diederich’, ‘Barbora Marsikova’, ‘Emmanuel G. Reynaud’, ‘Séamus Holden’, ‘Wiebke Jahr’, ‘Robert Haase’, ‘Kirti Prakash’]
Published 2022
Licensed ALL RIGHTS RESERVED
This comment article outlines the current state of the art in open hardware publishing in the context of microscopy.
Content type: Publication
REMBI: Recommended Metadata for Biological Images—enabling reuse of microscopy data in biology#
[‘Ugis Sarkans’, ‘et al.’]
Licensed ALL RIGHTS RESERVED
Tags: Research Data Management, Meta Data
Content type: Publication
The Fiji Updater#
[‘Robert Haase’]
Licensed ALL RIGHTS RESERVED
Article about the Fiji Updater explaining how it works in the background.
Tags: Imagej
Content type: Publication
https://analyticalscience.wiley.com/do/10.1002/was.0004000112/
arivis Vision4D Tutorials#
Licensed ALL RIGHTS RESERVED
Tags: Bioimage Analysis
Content type: Collection, Video
https://www.youtube.com/playlist?list=PLRc9dt9lEZh_SVRC4G5moOvgHuvjPwmv0
microlist#
Licensed ALL RIGHTS RESERVED
A searchable database of resources for light and electron microscopists
Content type: Collection