Reproducibility (5)#

6 Steps Towards Reproducible Research#

Heidi Seibold

Licensed CC-BY-4.0

A short book with 6 steps that get you closer to making your work reproducible.

Tags: Reproducibility, Research Data Management

Content type: Book

https://zenodo.org/records/12744715


Best practice data life cycle approaches for the life sciences#

Philippa C. Griffin, Jyoti Khadake, Kate S. LeMay, Suzanna E. Lewis, Sandra Orchard, et al.

Published 2018-06-04

Licensed UNKNOWN

The authors provide an overview of best practice data life cycle approaches for researchers in the life sciences/bioinformatics space with a particular focus on ‘omics’ datasets and computer-based data processing and analysis.

Tags: Bioinformatics, Reproducibility, Research Data Management, Sharing, Open Science

Content type: Publication

https://doi.org/10.12688/f1000research.12344.2


Promoting Reproducibility in Biomedical Research through Image Analysis#

David Barry

Published 2025-01-29

Licensed CC-BY-4.0 INTERNATIONAL

Slides presented at Empowering Healthcare with Automated Analysis at London Metropolitan University.

Tags: Reproducibility, Image Analysis

Content type: Slides

https://doi.org/10.5281/zenodo.14767944


Reporting and reproducibility in microscopy#

Published 2021-12-03

Licensed UNKNOWN

This Focus issue features a series of papers offering guidelines and tools for improving the tracking and reporting of microscopy metadata with an emphasis on reproducibility and data re-use.

Tags: Reproducibility, Metadata

Content type: Collection

https://www.nature.com/collections/djiciihhjh


Towards community-driven metadata standards for light microscopy - tiered specifications extending the OME model#

Mathias Hammer, Maximiliaan Huisman, Alessandro Rigano, Ulrike Boehm, James J. Chambers, et al.

Published 2022-07-10

Licensed UNKNOWN

Rigorous record-keeping and quality control are required to ensure the quality, reproducibility and value of imaging data. The 4DN Initiative and BINA here propose light Microscopy Metadata specifications that extend the OME data model, scale with experimental intent and complexity, and make it possible for scientists to create comprehensive records of imaging experiments.

Tags: Reproducibility, Bioimage Analysis, Metadata

Content type: Publication

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9271325/